Package details of kallisto

Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment. Pseudoalignment of reads preserves the key information needed for quantification, and kallisto is therefore not only fast, but also as accurate as existing quantification tools.

There is 1 version available for this package.


Version0.43.1
Defined atgnu/packages/bioinformatics.scm:11733
Symbol namekallisto
Installation command
guix package -i kallisto
Homepagehttp://pachterlab.github.io/kallisto/